Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869480.1_cds_XP_016433766.1_29890
CDS Infomation

[gene=LOC107760257] [db_xref=GeneID:107760257] [protein=cytochrome c biogenesis protein CCS1, chloroplastic-like] [protein_id=XP_016433766.1] [location=join(39830..40214,41458..41638,41725..41836,42369..42605,42709..42797,42927..43083,43485..43568,43668..43868)] [gbkey=CDS]
Sequence

ATGGAGATGTTAAAATTTTCAACTAAACCTTTAAGAACACCTCATTTTCATAATCATTTC
TGGGTTCCTCAAAATTCAAGAATTCTTGGTGTTTATAACAAAAAGGACCGCACTTTTTCA
TTTACTCGTACTTGTAAGCTCAAGACTTCAAAAGGGAAGAAAACGATCAAGAAAAAGATT
GTTCCTGGCAATATTTCTTCGCCGGACTCCGGCGGAGCGCCGCCGCTTTTGGAGCGGAAG
AAGGCGGCGGAAGGAACCACTAGGATTAATAATGCGGATGGTAAAGTGGTGTTTAAGAAA
GTGCACAAAAGGGTATTGGGAGTTCTCTCTAATTTGCCTTTGGTAATTGGTGAGATGTTT
GCTGCTGCTGGTTTAATGGCCTTAGGAACTATCATTGACAAAGGCGAGGTTCCAGAATTT
TACTTTCAGAATTTTTCTGAATTTACCCTTGGCCTTGATCACATGTTCTCGTCCCCTATT
TTCCTGGGGTCGTTGGCGATACTAGGTGCATCATTGATGGTTTGCACAAACACAACACAA
ATTCCCCTTCTGAAGGTAGCAAGAAGGCAGCCTTTCTTGAATTCAGCTGAGCCACTTCAA
ATGCAAGAAGATGCAGACACTCTGCCAAGAACATCGGTTAAAGACTCGGCTGTCAAACCG
CTAGAAGTTGGATATGAGGTATTCTTAAAAGGGCCATCTCTTCAAGCATTTAAGGGGTTG
GCAAGTCGACTTGCTTCAACTGTAGTACATTTCGCGCTGCTGCTTGCAGTGTCTGGAGGA
GGAACTCTCAGTGCAGCAGACAGTTTTGGAGGGGATGTAATTGCACCGCAATGGGTTCTA
TCGACTCTTTCTGATGCTTTTAGTACTAAGGTTCATGTCAATCGATCCTACTTGGACTAC
GATGAAAGCGGAGAGGTCTCAAAGTTTCATACTGATATTTCCCTATTTGACCTTAACGGA
AAGGAAGTACTGAGGAAAACCATAAGTGTCAATGATCCCTTAAGATCAATACAAGCTGGT
GATCTGCAATCAACTATTCTTAACGATAAAGAAGGGGAATTTGCTGGAGTTAGACAACCG
AACTCAAAGCTTCAAATTGAGATTGATGGAACAAAAATTGTCACTGTGGACGCAATTGGT
AGTACCAGCCTGGACCTAAAGACTGATCCAGGAGTACTAATAGTCTACGCTGGTTTTGGT
TCTCTAATGCTTACAACTTGCATTAGTTATTTGTCACATGCACAGCTCTCAGCCTTACAA
GATGGAAAAACTGAGGTGGTTGGTGGTAAGAATAATCAAGCCAAGGGCGATTTTCCGGAC
ACTGACGATCGCTGCTTCGTCGATCAAGTCCCTGAGTTAGTTGAATCATATTCTTCTACA
GAAGAATCTGATAGTTTCATTGGCTTCAGAATTCAAGTTGGAATTTGGAACAAGAAAGAT
TTTTGA

Peptide Sequence

PEP ID

XP_016433766.1
PEP Infomation

PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Nicotiana tabacum]
Sequence

MEMLKFSTKPLRTPHFHNHFWVPQNSRILGVYNKKDRTFSFTRTCKLKTSKGKKTIKKKI
VPGNISSPDSGGAPPLLERKKAAEGTTRINNADGKVVFKKVHKRVLGVLSNLPLVIGEMF
AAAGLMALGTIIDKGEVPEFYFQNFSEFTLGLDHMFSSPIFLGSLAILGASLMVCTNTTQ
IPLLKVARRQPFLNSAEPLQMQEDADTLPRTSVKDSAVKPLEVGYEVFLKGPSLQAFKGL
ASRLASTVVHFALLLAVSGGGTLSAADSFGGDVIAPQWVLSTLSDAFSTKVHVNRSYLDY
DESGEVSKFHTDISLFDLNGKEVLRKTISVNDPLRSIQAGDLQSTILNDKEGEFAGVRQP
NSKLQIEIDGTKIVTVDAIGSTSLDLKTDPGVLIVYAGFGSLMLTTCISYLSHAQLSALQ
DGKTEVVGGKNNQAKGDFPDTDDRCFVDQVPELVESYSSTEESDSFIGFRIQVGIWNKKD
F

Transcript Sequence

Gene sequence data has not been registered.